Bioinformatics

Evaluating Few-Shot Meta-Learning using STUNT for Microbiome-Based Disease Classification

Evaluating Few-Shot Meta-Learning using STUNT ...

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librarian
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Enabling Megascale Microbiome Analysis with DartUniFrac

Enabling Megascale Microbiome Analysis with Da...

Bioinformatics
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Rob Knight
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RankMap: Rank-based reference mapping for fast and robust cell type annotation in spatial and single-cell transcriptomics

RankMap: Rank-based reference mapping for fast...

Bioinformatics
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librarian
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scUnify: A Unified Framework for Zero-shot Inference of Single-Cell Foundation Models

scUnify: A Unified Framework for Zero-shot Inf...

Bioinformatics
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librarian
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LLPSight: enhancing prediction of LLPS-driving proteins using machine learning and protein Language Models

LLPSight: enhancing prediction of LLPS-driving...

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librarian
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Improved prediction of virus-human protein-protein interactions by incorporating network topology and viral molecular mimicry

Improved prediction of virus-human protein-pro...

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librarian
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Minimum Unique Substrings as a Context-Aware k-mer Alternative for Genomic Sequence Analysis

Minimum Unique Substrings as a Context-Aware k...

Bioinformatics
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Andrews Frimpong Adu
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snputils: A High-Performance Python Library for Genetic Variation and Population Structure

snputils: A High-Performance Python Library fo...

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librarian
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Large-Scale Statistical Dissection of Sequence-Derived Biochemical Features Distinguishing Soluble and Insoluble Proteins

Large-Scale Statistical Dissection of Sequence...

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librarian
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iGS: A Zero-Code Dual-Engine Graphical Software for Polygenic Trait Prediction

iGS: A Zero-Code Dual-Engine Graphical Softwar...

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Jiahao Zhang
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Characterizing and Mitigating Protocol-Dependent Gene Expression Bias in 3' and 5' Single-Cell RNA Sequencing

Characterizing and Mitigating Protocol-Depende...

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librarian
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A comprehensive assessment of tandem repeat genotyping methods for Nanopore long-read genomes

A comprehensive assessment of tandem repeat ge...

Bioinformatics
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librarian
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The limits of Bayesian estimates of divergence times in measurably evolving populations

The limits of Bayesian estimates of divergence...

Bioinformatics
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librarian
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selscape: A Snakemake Workflow for Investigating Genomic Landscapes of Natural Selection

selscape: A Snakemake Workflow for Investigati...

Bioinformatics
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librarian
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BiGAT-Fusion: Node-Wise Gated Bidirectional Graph Attention for Drug Repurposing

BiGAT-Fusion: Node-Wise Gated Bidirectional Gr...

Bioinformatics
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Wenze Ding
12 views
scDynOmics: An Optimized Transformer Model for Representation Learning from Single-Cell Multiomics

scDynOmics: An Optimized Transformer Model for...

Bioinformatics
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Johanna Klughammer
2 views
ExoFILT: Transfer learning for robust and accelerated analysis of exocytosis single-particle tracking data

ExoFILT: Transfer learning for robust and acce...

Bioinformatics
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librarian
3 views
GTA-5: A Unified Graph Transformer Framework for Ligands and Protein Binding Sites - Part I: Constructing the PDB Pocket and Ligand Space

GTA-5: A Unified Graph Transformer Framework f...

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Bogdan Ciambur
3 views
Benchmarking niche identification via domain segmentation for spatial transcriptomics data

Benchmarking niche identification via domain s...

Bioinformatics
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Jinpu Cai
4 views
Exploring the mechanism of Panax Notoginseng in the treatment of skin wound based on network pharmacology and experimental verification

Exploring the mechanism of Panax Notoginseng i...

Bioinformatics
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librarian
3 views
Multiscale Symbolic Morpho-Barcoding Reveals Region-Specific and Scale-Dependent Neuronal Organization

Multiscale Symbolic Morpho-Barcoding Reveals R...

Bioinformatics
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librarian
2 views
Explainable AI for end-to-end pathogen target discovery and molecular design

Explainable AI for end-to-end pathogen target ...

Bioinformatics
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librarian
2 views
t2pmhc: A Structure-Informed Graph Neural Network to predict TCR-pMHC Binding

t2pmhc: A Structure-Informed Graph Neural Netw...

Bioinformatics
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librarian
4 views
DNA fragment length analysis using machine learning assisted vibrational spectroscopy

DNA fragment length analysis using machine lea...

Bioinformatics
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Stephen-John Sammut
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Scalable mass-spectrometry-based molecular phylogeny with TreeMS2

Scalable mass-spectrometry-based molecular phy...

Bioinformatics
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librarian
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Assessment of Generative De Novo Peptide Design Methods for G Protein-Coupled Receptors

Assessment of Generative De Novo Peptide Desig...

Bioinformatics
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librarian
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Density-guided AlphaFold3 uncovers unmodelled conformations in β2-microglobulin

Density-guided AlphaFold3 uncovers unmodelled ...

Bioinformatics
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librarian
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STCS: A Platform-Agnostic Framework for Cell-Level Reconstruction in Sequencing-Based Spatial Transcriptomics

STCS: A Platform-Agnostic Framework for Cell-L...

Bioinformatics
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librarian
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A Query-to-Dashboard Framework for Reproducible PubMed-Scale Bibliometrics and Trend Intelligence

A Query-to-Dashboard Framework for Reproducibl...

Bioinformatics
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librarian
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A single cell atlas of mouse podocytes upon injury identifies kidney zone-dependent responses.

A single cell atlas of mouse podocytes upon in...

Bioinformatics
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Stuart Shankland
3 views
MolX: A Geometric Foundation Model for Protein-Ligand Modelling

MolX: A Geometric Foundation Model for Protein...

Bioinformatics
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librarian
3 views
Evaluating Limits of Machine Learning-Assisted Raman Spectroscopy in Classification of Biological Samples

Evaluating Limits of Machine Learning-Assisted...

Bioinformatics
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librarian
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