Bioinformatics

Predicting optimal growth temperatures of bacteria using learned structural information from a single protein

Predicting optimal growth temperatures of bact...

Bioinformatics
Avatar
Michael Hoffert
3 views
MorphoStat: A Statistics-Aware Pipeline for Morphological Profiling Analysis

MorphoStat: A Statistics-Aware Pipeline for Mo...

Bioinformatics
Avatar
librarian
3 views
Looking beyond stereotyped neuron structures reveals links between beading and morphological rearrangements in aging phenotypes.

Looking beyond stereotyped neuron structures r...

Bioinformatics
Avatar
Adriana San Miguel
3 views
Accounting for allelic diversity and multicopy gene detection improves the accuracy of antibiotic resistance genotypic determination

Accounting for allelic diversity and multicopy...

Bioinformatics
Avatar
Francesc Coll
5 views
Integrating Histology with Spatial Molecular Programs Using a Multimodal Foundation Model

Integrating Histology with Spatial Molecular P...

Bioinformatics
Avatar
Zongxu Zhang
48 views
Distinct fibrotic, epithelial and immune transcriptomic programs in phenotypes of chronic lung allograft dysfunction

Distinct fibrotic, epithelial and immune trans...

Bioinformatics
Avatar
craig-thorburn
55 views
CANCAN: high-resolution copy number and mutation heterogeneity analysis of DNA sequence data for clinical applications

CANCAN: high-resolution copy number and mutati...

Bioinformatics
Avatar
librarian
87 views
ToxCastLite: A portable semantic evidence graph linking in vitro bioactivity, in vivo toxicity, and exposure-use context

ToxCastLite: A portable semantic evidence grap...

Bioinformatics
Avatar
librarian
94 views
PocketBagger: Generalizable pocket druggability prediction via positive-unlabeled learning

PocketBagger: Generalizable pocket druggabilit...

Bioinformatics
Avatar
librarian
84 views
Multi-Scale Tri-Modal Histology Dataset Integrating Tumor Morphology, Immune Patterns, and Clinical Outcomes

Multi-Scale Tri-Modal Histology Dataset Integr...

Bioinformatics
Avatar
librarian
108 views
HESTIA: Scalable Multimodal Integration of Histology and High-Resolution Spatial Transcriptomics for Robust Spatial Domain Identification

HESTIA: Scalable Multimodal Integration of His...

Bioinformatics
Avatar
librarian
68 views
Interpretable Predictive Modeling for Medical Data Using Boolean Rule-aware Regression

Interpretable Predictive Modeling for Medical ...

Bioinformatics
Avatar
librarian
84 views
Elab2ARC: A Browser-Based Workspace for Converting Free-Text Protocols into rich FAIR digital objects

Elab2ARC: A Browser-Based Workspace for Conver...

Bioinformatics
Avatar
Sabrina Zander
95 views
A unified benchmark of synthetic data generation for clinical transcriptomic cancer cohorts

A unified benchmark of synthetic data generati...

Bioinformatics
Avatar
Christophe BATTAIL
86 views
Identifying Treatment Related Signatures In Glioblastoma Using KaleidoCell

Identifying Treatment Related Signatures In Gl...

Bioinformatics
Avatar
Jean Radig
92 views
Biological foundation models illuminate annotation blind spots in evolutionarily divergent genomes

Biological foundation models illuminate annota...

Bioinformatics
Avatar
librarian
83 views
TransXplorer: An automated translational discovery platform for RNA-seq data

TransXplorer: An automated translational disco...

Bioinformatics
Avatar
Varinder Madhav Verma
97 views
The human gut virome is a non-redundant and clinically informative component of the microbiome

The human gut virome is a non-redundant and cl...

Bioinformatics
Avatar
librarian
77 views
A modular Bayesian framework for inferring transmission networks from polyclonal infections, with application to Plasmodium falciparum

A modular Bayesian framework for inferring tra...

Bioinformatics
Avatar
librarian
86 views
Pan-Viral Conformational Landscapes of Frameshifting Elements Reveal Length-Dependent Plasticity and Antisense-Driven Structural Reprogramming

Pan-Viral Conformational Landscapes of Framesh...

Bioinformatics
Avatar
librarian
81 views
Deep learning models for chemical perturbation prediction do not yet utilise drug molecular features

Deep learning models for chemical perturbation...

Bioinformatics
Avatar
librarian
95 views
Metabolic Self-Organization: Emergence of Autonomous Agency in a Metabolically Constrained LLMs

Metabolic Self-Organization: Emergence of Auto...

Bioinformatics
Avatar
librarian
83 views
Physics-Informed Neural Networks for Parameter Recovery in the Repressilator Oscillatory Model

Physics-Informed Neural Networks for Parameter...

Bioinformatics
Avatar
Jordi Villà-Freixa
98 views
Exploring the Mechanism of Na⁺/K⁺-ATPase (NKA) and 20-HETE Ligand Interactions by in-silico modeling

Exploring the Mechanism of Na⁺/K⁺-ATPase (NKA)...

Bioinformatics
Avatar
librarian
78 views
TDP-43 regulates chromatin looping and gene transcription through binding and stabilizing DNA G-quadruplex structures

TDP-43 regulates chromatin looping and gene tr...

Bioinformatics
Avatar
librarian
82 views
Machine learning-based Personalized Dietary Recommendations to Achieve Desired Gut Microbial Compositions

Machine learning-based Personalized Dietary Re...

Bioinformatics
Avatar
librarian
87 views
Improving Variant Effect Prediction by Steering Sparse Mechanistic Features in Protein Language Models

Improving Variant Effect Prediction by Steerin...

Bioinformatics
Avatar
Yonghong He
86 views
DeSpotX: Identifiability-Based Decontamination for Spatial Transcriptomics

DeSpotX: Identifiability-Based Decontamination...

Bioinformatics
Avatar
librarian
85 views
Integrating trajectory inference and gene regulatory network analysis to resolve transcriptional programs of T cell state transitions in the tumor microenvironment

Integrating trajectory inference and gene regu...

Bioinformatics
Avatar
librarian
77 views
LOCALE: Local-Alignment Embeddings for Noise-Robust DNA Search at SRA Scale

LOCALE: Local-Alignment Embeddings for Noise-R...

Bioinformatics
Avatar
librarian
74 views
Evaluation of MeaSeq: comprehensive analysis and reporting of measles virus whole genome sequences.

Evaluation of MeaSeq: comprehensive analysis a...

Bioinformatics
Avatar
librarian
71 views
A multi-omic, spatial, and whole-slide image dataset of lung neuroendocrine tumours from the lungNENomics cohort

A multi-omic, spatial, and whole-slide image d...

Bioinformatics
Avatar
Nicolas Alcala
67 views
Load more